diff options
| -rw-r--r-- | poetry.lock | 854 |
1 files changed, 250 insertions, 604 deletions
diff --git a/poetry.lock b/poetry.lock index 67ee4d3..d9dcdd1 100644 --- a/poetry.lock +++ b/poetry.lock @@ -133,7 +133,7 @@ python-versions = ">=3.6" [[package]] name = "atomicwrites" -version = "1.4.0" +version = "1.4.1" description = "Atomic file writes." category = "dev" optional = false @@ -228,7 +228,7 @@ d = ["aiohttp (>=3.3.2)", "aiohttp-cors"] [[package]] name = "bleach" -version = "5.0.0" +version = "5.0.1" description = "An easy safelist-based HTML-sanitizing tool." category = "dev" optional = false @@ -239,7 +239,8 @@ six = ">=1.9.0" webencodings = "*" [package.extras] -dev = ["pip-tools (==6.5.1)", "pytest (==7.1.1)", "flake8 (==4.0.1)", "tox (==3.24.5)", "sphinx (==4.3.2)", "twine (==4.0.0)", "wheel (==0.37.1)", "hashin (==0.17.0)", "black (==22.3.0)", "mypy (==0.942)"] +css = ["tinycss2 (>=1.1.0,<1.2)"] +dev = ["build (==0.8.0)", "flake8 (==4.0.1)", "hashin (==0.17.0)", "pip-tools (==6.6.2)", "pytest (==7.1.2)", "Sphinx (==4.3.2)", "tox (==3.25.0)", "twine (==4.0.1)", "wheel (==0.37.1)", "black (==22.3.0)", "mypy (==0.961)"] [[package]] name = "boltons" @@ -267,7 +268,7 @@ python-versions = ">=3.6" [[package]] name = "cffi" -version = "1.15.0" +version = "1.15.1" description = "Foreign Function Interface for Python calling C code." category = "dev" optional = false @@ -278,11 +279,11 @@ pycparser = "*" [[package]] name = "charset-normalizer" -version = "2.0.12" +version = "2.1.0" description = "The Real First Universal Charset Detector. Open, modern and actively maintained alternative to Chardet." category = "dev" optional = false -python-versions = ">=3.5.0" +python-versions = ">=3.6.0" [package.extras] unicode_backport = ["unicodedata2"] @@ -335,7 +336,7 @@ python-versions = ">=3.6,<4.0" [[package]] name = "debugpy" -version = "1.6.0" +version = "1.6.2" description = "An implementation of the Debug Adapter Protocol for Python" category = "dev" optional = false @@ -531,7 +532,7 @@ flake8 = "*" [[package]] name = "fonttools" -version = "4.33.3" +version = "4.34.4" description = "Tools to manipulate font files" category = "dev" optional = false @@ -618,7 +619,7 @@ gitdb = ">=4.0.1,<5" [[package]] name = "google-auth" -version = "2.8.0" +version = "2.9.1" description = "Google Authentication Library" category = "dev" optional = false @@ -653,7 +654,7 @@ tool = ["click (>=6.0.0)"] [[package]] name = "grpcio" -version = "1.46.3" +version = "1.47.0" description = "HTTP/2-based RPC framework" category = "dev" optional = false @@ -663,7 +664,7 @@ python-versions = ">=3.6" six = ">=1.5.2" [package.extras] -protobuf = ["grpcio-tools (>=1.46.3)"] +protobuf = ["grpcio-tools (>=1.47.0)"] [[package]] name = "h5py" @@ -699,7 +700,7 @@ python-versions = ">=3.5" [[package]] name = "importlib-metadata" -version = "4.11.4" +version = "4.12.0" description = "Read metadata from Python packages" category = "dev" optional = false @@ -711,11 +712,11 @@ zipp = ">=0.5" [package.extras] docs = ["sphinx", "jaraco.packaging (>=9)", "rst.linker (>=1.9)"] perf = ["ipython"] -testing = ["pytest (>=6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytest-cov", "pytest-enabler (>=1.0.1)", "packaging", "pyfakefs", "flufl-flake8", "pytest-perf (>=0.9.2)", "pytest-black (>=0.3.7)", "pytest-mypy (>=0.9.1)", "importlib-resources (>=1.3)"] +testing = ["pytest (>=6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytest-cov", "pytest-enabler (>=1.3)", "packaging", "pyfakefs", "flufl-flake8", "pytest-perf (>=0.9.2)", "pytest-black (>=0.3.7)", "pytest-mypy (>=0.9.1)", "importlib-resources (>=1.3)"] [[package]] name = "ipykernel" -version = "6.15.0" +version = "6.15.1" description = "IPython Kernel for Jupyter" category = "dev" optional = false @@ -783,7 +784,7 @@ python-versions = "*" [[package]] name = "ipywidgets" -version = "7.7.0" +version = "7.7.1" description = "IPython HTML widgets for Jupyter" category = "dev" optional = false @@ -794,7 +795,6 @@ ipykernel = ">=4.5.1" ipython = {version = ">=4.0.0", markers = "python_version >= \"3.3\""} ipython-genutils = ">=0.2.0,<0.3.0" jupyterlab-widgets = {version = ">=1.0.0", markers = "python_version >= \"3.6\""} -nbformat = ">=4.2.0" traitlets = ">=4.3.1" widgetsnbextension = ">=3.6.0,<3.7.0" @@ -851,7 +851,7 @@ dev = ["hypothesis"] [[package]] name = "jsonschema" -version = "4.6.0" +version = "4.7.2" description = "An implementation of JSON Schema validation for Python" category = "dev" optional = false @@ -904,11 +904,11 @@ test = ["codecov", "coverage", "ipykernel (>=6.5)", "ipython", "mypy", "pre-comm [[package]] name = "jupyter-console" -version = "6.4.3" +version = "6.4.4" description = "Jupyter terminal console" category = "dev" optional = false -python-versions = ">=3.6" +python-versions = ">=3.7" [package.dependencies] ipykernel = "*" @@ -922,7 +922,7 @@ test = ["pexpect"] [[package]] name = "jupyter-core" -version = "4.10.0" +version = "4.11.1" description = "Jupyter core package. A base package on which Jupyter projects rely." category = "dev" optional = false @@ -937,7 +937,7 @@ test = ["ipykernel", "pre-commit", "pytest", "pytest-cov", "pytest-timeout"] [[package]] name = "jupyter-server" -version = "1.17.1" +version = "1.18.1" description = "The backend—i.e. core services, APIs, and REST endpoints—to Jupyter web applications." category = "dev" optional = false @@ -996,7 +996,7 @@ python-versions = ">=3.7" [[package]] name = "jupyterlab-server" -version = "2.14.0" +version = "2.15.0" description = "A set of server components for JupyterLab and JupyterLab like applications." category = "dev" optional = false @@ -1018,7 +1018,7 @@ test = ["codecov", "ipykernel", "jupyter-server", "openapi-core (>=0.14.2)", "op [[package]] name = "jupyterlab-widgets" -version = "1.1.0" +version = "1.1.1" description = "A JupyterLab extension." category = "dev" optional = false @@ -1026,7 +1026,7 @@ python-versions = ">=3.6" [[package]] name = "kiwisolver" -version = "1.4.3" +version = "1.4.4" description = "A fast implementation of the Cassowary constraint solver" category = "dev" optional = false @@ -1049,11 +1049,11 @@ dev = ["colorama (>=0.3.4)", "docutils (==0.16)", "flake8 (>=3.7.7)", "tox (>=3. [[package]] name = "markdown" -version = "3.3.7" +version = "3.4.1" description = "Python implementation of Markdown." category = "dev" optional = false -python-versions = ">=3.6" +python-versions = ">=3.7" [package.dependencies] importlib-metadata = {version = ">=4.4", markers = "python_version < \"3.10\""} @@ -1157,23 +1157,39 @@ python-versions = "*" [[package]] name = "nbclassic" -version = "0.3.7" -description = "Jupyter Notebook as a Jupyter Server extension." +version = "0.4.3" +description = "A web-based notebook environment for interactive computing" category = "dev" optional = false python-versions = ">=3.7" [package.dependencies] +argon2-cffi = "*" +ipykernel = "*" +ipython-genutils = "*" +jinja2 = "*" +jupyter-client = ">=6.1.1" +jupyter-core = ">=4.6.1" jupyter-server = ">=1.8" -notebook = "<7" +nbconvert = ">=5" +nbformat = "*" +nest-asyncio = ">=1.5" notebook-shim = ">=0.1.0" +prometheus-client = "*" +pyzmq = ">=17" +Send2Trash = ">=1.8.0" +terminado = ">=0.8.3" +tornado = ">=6.1" +traitlets = ">=4.2.1" [package.extras] -test = ["pytest", "pytest-tornasync", "pytest-console-scripts"] +docs = ["sphinx", "nbsphinx", "sphinxcontrib-github-alt", "sphinx-rtd-theme", "myst-parser"] +json-logging = ["json-logging"] +test = ["pytest", "coverage", "requests", "testpath", "nbval", "selenium (==4.1.5)", "pytest-cov", "pytest-tornasync", "requests-unixsocket"] [[package]] name = "nbclient" -version = "0.6.4" +version = "0.6.6" description = "A client library for executing notebooks. Formerly nbconvert's ExecutePreprocessor." category = "dev" optional = false @@ -1315,7 +1331,7 @@ test = ["pytest", "pytest-tornasync", "pytest-console-scripts"] [[package]] name = "numpy" -version = "1.22.4" +version = "1.23.1" description = "NumPy is the fundamental package for array computing with Python." category = "dev" optional = false @@ -1438,14 +1454,14 @@ python-versions = "*" [[package]] name = "pillow" -version = "9.1.1" +version = "9.2.0" description = "Python Imaging Library (Fork)" category = "dev" optional = false python-versions = ">=3.7" [package.extras] -docs = ["olefile", "sphinx (>=2.4)", "sphinx-copybutton", "sphinx-issues (>=3.0.1)", "sphinx-removed-in", "sphinx-rtd-theme (>=1.0)", "sphinxext-opengraph"] +docs = ["furo", "olefile", "sphinx (>=2.4)", "sphinx-copybutton", "sphinx-issues (>=3.0.1)", "sphinx-removed-in", "sphinxext-opengraph"] tests = ["check-manifest", "coverage", "defusedxml", "markdown2", "olefile", "packaging", "pyroma", "pytest", "pytest-cov", "pytest-timeout"] [[package]] @@ -1486,7 +1502,7 @@ test = ["pytest (>=2.7.3)", "pytest-cov", "coveralls", "futures", "pytest-benchm [[package]] name = "prompt-toolkit" -version = "3.0.29" +version = "3.0.30" description = "Library for building powerful interactive command lines in Python" category = "dev" optional = false @@ -1673,7 +1689,7 @@ testing = ["fields", "hunter", "process-tests", "six", "pytest-xdist", "virtuale [[package]] name = "pytest-mock" -version = "3.7.0" +version = "3.8.2" description = "Thin-wrapper around the mock package for easier use with pytest" category = "dev" optional = false @@ -1698,7 +1714,7 @@ six = ">=1.5" [[package]] name = "pytorch-lightning" -version = "1.6.4" +version = "1.6.5" description = "PyTorch Lightning is the lightweight PyTorch wrapper for ML researchers. Scale your models. Write less boilerplate." category = "dev" optional = false @@ -1718,11 +1734,11 @@ tqdm = ">=4.57.0" typing-extensions = ">=4.0.0" [package.extras] -all = ["matplotlib (>3.1)", "torchtext (>=0.9)", "omegaconf (>=2.0.5)", "hydra-core (>=1.0.5)", "jsonargparse[signatures] (>=4.7.1)", "gcsfs (>=2021.5.0)", "rich (>=10.2.2,!=10.15.*)", "neptune-client (>=0.10.0)", "comet-ml (>=3.1.12)", "mlflow (>=1.0.0)", "test-tube (>=0.7.5)", "wandb (>=0.8.21)", "coverage (>=6.4)", "codecov (>=2.1)", "pytest (>=6.0)", "pytest-rerunfailures (>=10.2)", "mypy (>=0.920)", "flake8 (>=3.9.2)", "pre-commit (>=1.0)", "pytest-forked", "cloudpickle (>=1.3)", "scikit-learn (>0.22.1)", "onnxruntime", "pandas", "torchvision (>=0.9)", "gym[classic_control] (>=0.17.0)", "ipython", "fairscale (>=0.4.5)", "deepspeed", "horovod (>=0.21.2,!=0.24.0)", "hivemind (>=1.0.1)"] +all = ["matplotlib (>3.1)", "torchtext (>=0.9)", "omegaconf (>=2.0.5)", "hydra-core (>=1.0.5)", "jsonargparse[signatures] (>=4.7.1)", "gcsfs (>=2021.5.0)", "rich (>=10.2.2,!=10.15.0.a)", "neptune-client (>=0.10.0)", "comet-ml (>=3.1.12)", "mlflow (>=1.0.0)", "test-tube (>=0.7.5)", "wandb (>=0.8.21)", "coverage (>=6.4)", "codecov (>=2.1)", "pytest (>=6.0)", "pytest-rerunfailures (>=10.2)", "mypy (>=0.920)", "flake8 (>=3.9.2)", "pre-commit (>=1.0)", "pytest-forked", "cloudpickle (>=1.3)", "scikit-learn (>0.22.1)", "onnxruntime", "pandas", "torchvision (>=0.9)", "gym[classic_control] (>=0.17.0)", "ipython", "fairscale (>=0.4.5)", "deepspeed", "horovod (>=0.21.2,!=0.24.0)", "hivemind (>=1.0.1)"] deepspeed = ["deepspeed"] -dev = ["matplotlib (>3.1)", "torchtext (>=0.9)", "omegaconf (>=2.0.5)", "hydra-core (>=1.0.5)", "jsonargparse[signatures] (>=4.7.1)", "gcsfs (>=2021.5.0)", "rich (>=10.2.2,!=10.15.*)", "neptune-client (>=0.10.0)", "comet-ml (>=3.1.12)", "mlflow (>=1.0.0)", "test-tube (>=0.7.5)", "wandb (>=0.8.21)", "coverage (>=6.4)", "codecov (>=2.1)", "pytest (>=6.0)", "pytest-rerunfailures (>=10.2)", "mypy (>=0.920)", "flake8 (>=3.9.2)", "pre-commit (>=1.0)", "pytest-forked", "cloudpickle (>=1.3)", "scikit-learn (>0.22.1)", "onnxruntime", "pandas"] +dev = ["matplotlib (>3.1)", "torchtext (>=0.9)", "omegaconf (>=2.0.5)", "hydra-core (>=1.0.5)", "jsonargparse[signatures] (>=4.7.1)", "gcsfs (>=2021.5.0)", "rich (>=10.2.2,!=10.15.0.a)", "neptune-client (>=0.10.0)", "comet-ml (>=3.1.12)", "mlflow (>=1.0.0)", "test-tube (>=0.7.5)", "wandb (>=0.8.21)", "coverage (>=6.4)", "codecov (>=2.1)", "pytest (>=6.0)", "pytest-rerunfailures (>=10.2)", "mypy (>=0.920)", "flake8 (>=3.9.2)", "pre-commit (>=1.0)", "pytest-forked", "cloudpickle (>=1.3)", "scikit-learn (>0.22.1)", "onnxruntime", "pandas"] examples = ["torchvision (>=0.9)", "gym[classic_control] (>=0.17.0)", "ipython"] -extra = ["matplotlib (>3.1)", "torchtext (>=0.9)", "omegaconf (>=2.0.5)", "hydra-core (>=1.0.5)", "jsonargparse[signatures] (>=4.7.1)", "gcsfs (>=2021.5.0)", "rich (>=10.2.2,!=10.15.*)"] +extra = ["matplotlib (>3.1)", "torchtext (>=0.9)", "omegaconf (>=2.0.5)", "hydra-core (>=1.0.5)", "jsonargparse[signatures] (>=4.7.1)", "gcsfs (>=2021.5.0)", "rich (>=10.2.2,!=10.15.0.a)"] fairscale = ["fairscale (>=0.4.5)"] hivemind = ["hivemind (>=1.0.1)"] horovod = ["horovod (>=0.21.2,!=0.24.0)"] @@ -1748,7 +1764,7 @@ python-versions = "*" [[package]] name = "pywinpty" -version = "2.0.5" +version = "2.0.6" description = "Pseudo terminal support for Windows from Python." category = "dev" optional = false @@ -1764,7 +1780,7 @@ python-versions = ">=3.6" [[package]] name = "pyzmq" -version = "23.1.0" +version = "23.2.0" description = "Python bindings for 0MQ" category = "dev" optional = false @@ -1812,7 +1828,7 @@ test = ["pytest (>=6,!=7.0.0,!=7.0.1)", "pytest-cov (>=3.0.0)", "pytest-qt"] [[package]] name = "regex" -version = "2022.6.2" +version = "2022.7.9" description = "Alternative regular expression module, to replace re." category = "dev" optional = false @@ -1820,7 +1836,7 @@ python-versions = ">=3.6" [[package]] name = "requests" -version = "2.28.0" +version = "2.28.1" description = "Python HTTP for Humans." category = "dev" optional = false @@ -1828,13 +1844,13 @@ python-versions = ">=3.7, <4" [package.dependencies] certifi = ">=2017.4.17" -charset-normalizer = ">=2.0.0,<2.1.0" +charset-normalizer = ">=2,<3" idna = ">=2.5,<4" urllib3 = ">=1.21.1,<1.27" [package.extras] socks = ["PySocks (>=1.5.6,!=1.5.7)"] -use_chardet_on_py3 = ["chardet (>=3.0.2,<5)"] +use_chardet_on_py3 = ["chardet (>=3.0.2,<6)"] [[package]] name = "requests-oauthlib" @@ -1903,7 +1919,7 @@ win32 = ["pywin32"] [[package]] name = "sentry-sdk" -version = "1.5.12" +version = "1.7.2" description = "Python client for Sentry (https://sentry.io)" category = "dev" optional = false @@ -1956,16 +1972,17 @@ testing = ["pytest (>=6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytest- [[package]] name = "setuptools-scm" -version = "6.4.2" +version = "7.0.5" description = "the blessed package to manage your versions by scm tags" category = "dev" optional = false -python-versions = ">=3.6" +python-versions = ">=3.7" [package.dependencies] packaging = ">=20.0" setuptools = "*" tomli = ">=1.0.0" +typing-extensions = "*" [package.extras] test = ["pytest (>=6.2)", "virtualenv (>20)"] @@ -2054,11 +2071,11 @@ tests = ["pytest", "typeguard", "pygments", "littleutils", "cython"] [[package]] name = "stevedore" -version = "3.5.0" +version = "4.0.0" description = "Manage dynamic plugins for Python applications" category = "dev" optional = false -python-versions = ">=3.6" +python-versions = ">=3.8" [package.dependencies] pbr = ">=2.0.0,<2.1.0 || >2.1.0" @@ -2151,7 +2168,7 @@ python-versions = ">=3.7" [[package]] name = "torch" -version = "1.11.0" +version = "1.12.0" description = "Tensors and Dynamic neural networks in Python with strong GPU acceleration" category = "dev" optional = false @@ -2204,11 +2221,11 @@ scipy = ["scipy"] [[package]] name = "tornado" -version = "6.1" +version = "6.2" description = "Tornado is a Python web framework and asynchronous networking library, originally developed at FriendFeed." category = "dev" optional = false -python-versions = ">= 3.5" +python-versions = ">= 3.7" [[package]] name = "tqdm" @@ -2260,7 +2277,7 @@ test = ["pytest", "typing-extensions", "mypy"] [[package]] name = "typing-extensions" -version = "4.2.0" +version = "4.3.0" description = "Backported and Experimental Type Hints for Python 3.7+" category = "dev" optional = false @@ -2268,11 +2285,11 @@ python-versions = ">=3.7" [[package]] name = "urllib3" -version = "1.26.9" +version = "1.26.10" description = "HTTP library with thread-safe connection pooling, file post, and more." category = "dev" optional = false -python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, <4" +python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*, <4" [package.extras] brotli = ["brotlicffi (>=0.8.0)", "brotli (>=1.0.9)", "brotlipy (>=0.6.0)"] @@ -2281,7 +2298,7 @@ socks = ["PySocks (>=1.5.6,!=1.5.7,<2.0)"] [[package]] name = "wandb" -version = "0.12.18" +version = "0.12.21" description = "A CLI and library for interacting with the Weights and Biases API." category = "dev" optional = false @@ -2311,6 +2328,7 @@ grpc = ["grpcio (>=1.27.2)"] kubeflow = ["kubernetes", "minio", "google-cloud-storage", "sh"] launch = ["nbconvert", "nbformat", "chardet", "iso8601", "typing-extensions", "boto3", "google-cloud-storage", "kubernetes"] media = ["numpy", "moviepy", "pillow", "bokeh", "soundfile", "plotly", "rdkit-pypi"] +models = ["cloudpickle"] sweeps = ["sweeps (>=0.1.0)"] [[package]] @@ -2331,7 +2349,7 @@ python-versions = "*" [[package]] name = "websocket-client" -version = "1.3.2" +version = "1.3.3" description = "WebSocket client for Python with low level API options" category = "dev" optional = false @@ -2366,7 +2384,7 @@ test = ["pytest (>=3.0.0)", "pytest-cov"] [[package]] name = "widgetsnbextension" -version = "3.6.0" +version = "3.6.1" description = "IPython HTML widgets for Jupyter" category = "dev" optional = false @@ -2400,15 +2418,15 @@ multidict = ">=4.0" [[package]] name = "zipp" -version = "3.8.0" +version = "3.8.1" description = "Backport of pathlib-compatible object wrapper for zip files" category = "dev" optional = false python-versions = ">=3.7" [package.extras] -docs = ["sphinx", "jaraco.packaging (>=9)", "rst.linker (>=1.9)"] -testing = ["pytest (>=6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytest-cov", "pytest-enabler (>=1.0.1)", "jaraco-itertools", "func-timeout", "pytest-black (>=0.3.7)", "pytest-mypy (>=0.9.1)"] +docs = ["sphinx", "jaraco.packaging (>=9)", "rst.linker (>=1.9)", "jaraco.tidelift (>=1.4)"] +testing = ["pytest (>=6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytest-cov", "pytest-enabler (>=1.3)", "jaraco-itertools", "func-timeout", "pytest-black (>=0.3.7)", "pytest-mypy (>=0.9.1)"] [metadata] lock-version = "1.1" @@ -2548,10 +2566,7 @@ async-timeout = [ {file = "async-timeout-4.0.2.tar.gz", hash = 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